| T | 8-Jan | Overview of course | | | |
| Th | 10-Jan | Introduction to Probability and Statistics | The linkage between Popperian science and statistical analysis | | |
| T | 15-Jan | Introduction to Probability and Statistics | Null distribution-resampling | | |
| Th | 17-Jan | Analytic Graphing and Theory: Data Visualization | Analytical Graphing | JMP Pro Basic Graphics | |
| T | 22-Jan | Basic Stats and Concepts | Basic statistical concepts | Worksheet 1: JMP Pro Introduction worksheet
Answer key
Data files:
ncc_point_contact_per_cover
ourworld
data for analytical graphing handout | |
| Th | 24-Jan | Basic Stats: Part 2 continued
Hypothesis Testing | Introduction to hypothesis testing | Worksheet 2: Distributional statistics, assessing normality and hypothesis test
Answer Key
Data files:
ab sizes
Heights | R code for t test |
| T | 29-Jan | Finish Hypothesis Testing
Introduction to Power analysis | Introduction to power analysis | Worksheet 3: Replication, transformation and power
Answer key
Data files:
Ourworld
Proportions
Heights | Power Analysis
Resampling
Transformations |
| Th | 31-Jan | Introduction to linear regression | Introduction to linear regression-part 1
Introduction to linear regression-part 2 | T test and Regression
Data files
T Test or Regression | |
| T | 5-Feb | Introduction to (simple) multiple regression and non-linear regression | Introduction to simple multiple and non-linear regression and model fit | Worksheet 4: Multiple Regression, Non-Linear Regression
Answer key
Data files:
SpeciesArea
Limpet_MR | |
| Th | 7-Feb | Introduction to (nonlinear regression)
Introduction to single factor ANOVA (Part 1) | Introduction to simple multiple and non-linear regression and model fit
Introduction to ANOVA (single factor) Part 1 | | |
| T | 12-Feb | Introduction to single factor ANOVA (Part 2) | Introduction to ANOVA (single factor) Part 2 | Worksheet 5: Single Factor ANOVA and randomized block designs
Answer Key
Data files:
Sea star colors all sites two sample
Grazers and Oak Seedlings | ANOVA for Skeptics |
| Th | 14-Feb | Introduction to randomized block designs | Introduction to randomized block designs | Worksheet 5: Single Factor ANOVA and randomized block designs
Answer Key
Data files:
Sea star colors all sites two sample
Grazers and Oak Seedlings | ANOVA for Skeptics |
| T | 19-Feb | Introduction of factorial ANOVA | Introduction to factorial ANOVA | Mid course review
Mid course review answer key
Data files:
Limpets
Seedlings | |
| Th | 21-Feb | Nested and Repeated Measures ANOVA | Nested and repeated measures ANOVA | Worksheet 8: Nested and Repeated Measures ANOVA
Answer key
Data files:
Repeated measures seedling growth as a function of competition and watering
Nested - Variance components | |
| T | 26-Feb | Analysis of Covariance | Analysis of covariance | Worksheet 6: ANCOVA
Answer key
Data files:
ANCOVA Different slopes 1 covariate
ANCOVA Different slopes 2 covariate
ANCOVA seedlings, water and distance from bushes | |
| Th | 28-Feb | Frequency analysis | Analyzing Frequencies | Worksheet 7: Contingency analysis (frequencies)
Answer key
Data files:
Car Poll
abalone frequencies by MPA status | |
| T | 5-Mar | Multivariate Analysis | Multivariate Analysis 1 - PCA | Worksheet 9: PCA
Answer key
Data files:
Ourworld modified PCA | |
| Th | 7-Mar | Multivariate Analysis | Multivariate analysis 2: PCA Regression and Cluster analysis | Worksheet 10: PCA regression and cluster analysis
Answer key
Data files:
Ourworld modified PCA | |
| T | 12-Mar | Multivariate Analysis | Discriminant Function Analysis | Worksheet 11: Discriminant Function Analysis
Answer key
Data files:
Iris | |
| Th | 14-Mar | Multidimensional scaling | Introduction to MDS, PERMANOVA, ANOSIM, SIMPER, BIOENV
Roadmap of statistical approaches | | |